HL_8R0A_003
3D structure
- PDB id
- 8R0A (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the cross-exon pre-B+5'ss complex
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 5.8 Å
Loop
- Sequence
- CCAAUGAGGUCUAUCCGAGG
- Length
- 20 nucleotides
- Bulged bases
- 8R0A|1|4|U|31, 8R0A|1|4|U|36, 8R0A|1|4|U|40
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8R0A|1|4|C|27
8R0A|1|4|C|28
8R0A|1|4|A|29
8R0A|1|4|A|30
8R0A|1|4|U|31
8R0A|1|4|G|32
8R0A|1|4|A|33
8R0A|1|4|G|34
8R0A|1|4|G|35
8R0A|1|4|U|36
8R0A|1|4|C|37
8R0A|1|4|U|38
8R0A|1|4|A|39
8R0A|1|4|U|40
8R0A|1|4|C|41
8R0A|1|4|C|42
8R0A|1|4|G|43
8R0A|1|4|A|44
8R0A|1|4|G|45
8R0A|1|4|G|46
Current chains
- Chain 4
- U4 snRNA
Nearby chains
- Chain L
- U4/U6 small nuclear ribonucleoprotein Prp31
- Chain M
- NHP2-like protein 1, N-terminally processed
- Chain N
- Pre-mRNA-processing factor 6
Coloring options: