HL_8RCL_041

3D structure

PDB id

8RCL (explore in PDB, NAKB, or RNA 3D Hub)

Description

Escherichia coli paused disome complex (Non-rotated disome interface class 1)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.49 Å

Loop

Sequence

CGACAC(6MZ)G

Length

8 nucleotides

Bulged bases

8RCL|1|72|A|1614, 8RCL|1|72|A|1616

QA status

Modified nucleotides: 6MZ

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8RCL_041 not in the Motif Atlas

Homologous match to HL_5J7L_173

Geometric discrepancy: 0.1012

The information below is about HL_5J7L_173

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_89567.2

Basepair signature

cWW-F-F-F

Number of instances in this motif group

8

Unit IDs

8RCL|1|72|C|1612
8RCL|1|72|G|1613
8RCL|1|72|A|1614
8RCL|1|72|C|1615
8RCL|1|72|A|1616
8RCL|1|72|C|1617
8RCL|1|72|6MZ|1618
8RCL|1|72|G|1619

Current chains

Chain 72

23S ribosomal RNA

Nearby chains

Chain l2

50S ribosomal protein L34