HL_8RCM_027

3D structure

PDB id

8RCM (explore in PDB, NAKB, or RNA 3D Hub)

Description

Escherichia coli paused disome complex (Non-rotated disome interface class 2)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.59 Å

Loop

Sequence

G(PSU)GCUAACGU

Length

10 nucleotides

Bulged bases

8RCM|1|72|U|958, 8RCM|1|72|C|961

QA status

Modified nucleotides: PSU

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8RCM_027 not in the Motif Atlas

Homologous match to HL_5J7L_159

Geometric discrepancy: 0.1311

The information below is about HL_5J7L_159

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8RCM|1|72|G|954
8RCM|1|72|PSU|955
8RCM|1|72|G|956
8RCM|1|72|C|957
8RCM|1|72|U|958
8RCM|1|72|A|959
8RCM|1|72|A|960
8RCM|1|72|C|961
8RCM|1|72|G|962
8RCM|1|72|U|963

Current chains

Chain 72

23S ribosomal RNA

Nearby chains

Chain 82

5S ribosomal RNA; 5S rRNA

Chain h2

50S ribosomal protein L16