HL_8RCM_134

3D structure

PDB id

8RCM (explore in PDB, NAKB, or RNA 3D Hub)

Description

Escherichia coli paused disome complex (Non-rotated disome interface class 2)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.59 Å

Loop

Sequence

GAUCAGAAUGC

Length

11 nucleotides

Bulged bases

8RCM|1|A2|U|1364

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8RCM_134 not in the Motif Atlas

Homologous match to HL_4LFB_030

Geometric discrepancy: 0.0996

The information below is about HL_4LFB_030

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_86432.1

Basepair signature

cWW-tWH-tWH-F-F-F

Number of instances in this motif group

5

Unit IDs

8RCM|1|A2|G|1356
8RCM|1|A2|A|1357
8RCM|1|A2|U|1358
8RCM|1|A2|C|1359
8RCM|1|A2|A|1360
8RCM|1|A2|G|1361
8RCM|1|A2|A|1362
8RCM|1|A2|A|1363
8RCM|1|A2|U|1364
8RCM|1|A2|G|1365
8RCM|1|A2|C|1366

Current chains

Chain A2

16S ribosomal RNA

Nearby chains

Chain I2

Small ribosomal subunit protein uS9

Chain J2

30S ribosomal protein S10

Chain N2

Small ribosomal subunit protein uS14