HL_8RCM_143
3D structure
- PDB id
- 8RCM (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Escherichia coli paused disome complex (Non-rotated disome interface class 2)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.59 Å
Loop
- Sequence
- G(RSP)UICG(2MA)AC
- Length
- 9 nucleotides
- Bulged bases
- 8RCM|1|X2|U|34
- QA status
- Modified nucleotides: RSP, 2MA
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8RCM_143 not in the Motif Atlas
- Homologous match to HL_1U0B_002
- Geometric discrepancy: 0.4313
- The information below is about HL_1U0B_002
- Detailed Annotation
- tRNA anticodon loop
- Broad Annotation
- Anticodon loop
- Motif group
- HL_81376.1
- Basepair signature
- cWW-F-F-F-F-F-F-F
- Number of instances in this motif group
- 29
Unit IDs
8RCM|1|X2|G|32
8RCM|1|X2|RSP|33
8RCM|1|X2|U|34
8RCM|1|X2|I|35
8RCM|1|X2|C|36
8RCM|1|X2|G|37
8RCM|1|X2|2MA|38
8RCM|1|X2|A|39
8RCM|1|X2|C|40
Current chains
- Chain X2
- tRNA-Arg (E-site)
Nearby chains
- Chain A2
- Small subunit ribosomal RNA; SSU rRNA
- Chain G2
- 30S ribosomal protein S7
- Chain K2
- Small ribosomal subunit protein uS11
- Chain V2
- messenger RNA
- Chain W
- Transfer RNA; tRNA
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