HL_8RCS_027

3D structure

PDB id

8RCS (explore in PDB, NAKB, or RNA 3D Hub)

Description

Escherichia coli paused disome complex (Rotated disome interface class 1)

Experimental method

ELECTRON MICROSCOPY

Resolution

4.46 Å

Loop

Sequence

G(PSU)GCUAACGU

Length

10 nucleotides

Bulged bases

8RCS|1|72|U|958, 8RCS|1|72|C|961

QA status

Modified nucleotides: PSU

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8RCS_027 not in the Motif Atlas

Homologous match to HL_5J7L_159

Geometric discrepancy: 0.1524

The information below is about HL_5J7L_159

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8RCS|1|72|G|954
8RCS|1|72|PSU|955
8RCS|1|72|G|956
8RCS|1|72|C|957
8RCS|1|72|U|958
8RCS|1|72|A|959
8RCS|1|72|A|960
8RCS|1|72|C|961
8RCS|1|72|G|962
8RCS|1|72|U|963

Current chains

Chain 72

23S ribosomal RNA

Nearby chains

Chain 82

5S ribosomal RNA; 5S rRNA

Chain h2

50S ribosomal protein L16