HL_8RCS_080

3D structure

PDB id

8RCS (explore in PDB, NAKB, or RNA 3D Hub)

Description

Escherichia coli paused disome complex (Rotated disome interface class 1)

Experimental method

ELECTRON MICROSCOPY

Resolution

4.46 Å

Loop

Sequence

AACUGAGACACGGU

Length

14 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8RCS_080 not in the Motif Atlas

Homologous match to HL_6CZR_079

Geometric discrepancy: 0.1673

The information below is about HL_6CZR_079

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_81205.2

Basepair signature

cWW-cWW-tWH-F-tWH-F-F-F-F-F

Number of instances in this motif group

3

Unit IDs

8RCS|1|A1|A|320
8RCS|1|A1|A|321
8RCS|1|A1|C|322
8RCS|1|A1|U|323
8RCS|1|A1|G|324
8RCS|1|A1|A|325
8RCS|1|A1|G|326
8RCS|1|A1|A|327
8RCS|1|A1|C|328
8RCS|1|A1|A|329
8RCS|1|A1|C|330
8RCS|1|A1|G|331
8RCS|1|A1|G|332
8RCS|1|A1|U|333

Current chains

Chain A1

16S ribosomal RNA

Nearby chains

Chain P1

30S ribosomal protein S16

Chain T1

Small ribosomal subunit protein bS20