HL_8RCS_124

3D structure

PDB id

8RCS (explore in PDB, NAKB, or RNA 3D Hub)

Description

Escherichia coli paused disome complex (Rotated disome interface class 1)

Experimental method

ELECTRON MICROSCOPY

Resolution

4.46 Å

Loop

Sequence

CGCAAG

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8RCS_124 not in the Motif Atlas

Homologous match to HL_4LFB_020

Geometric discrepancy: 0.1115

The information below is about HL_4LFB_020

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_34789.2

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

397

Unit IDs

8RCS|1|A2|C|897
8RCS|1|A2|G|898
8RCS|1|A2|C|899
8RCS|1|A2|A|900
8RCS|1|A2|A|901
8RCS|1|A2|G|902

Current chains

Chain A2

16S ribosomal RNA

Nearby chains

Chain 72

Large subunit ribosomal RNA; LSU rRNA