HL_8RCT_034

3D structure

PDB id

8RCT (explore in PDB, NAKB, or RNA 3D Hub)

Description

Escherichia coli paused disome complex (Rotated disome interface class 2)

Experimental method

ELECTRON MICROSCOPY

Resolution

5.32 Å

Loop

Sequence

GUUAAUC

Length

7 nucleotides

Bulged bases

8RCT|1|72|U|1325, 8RCT|1|72|U|1329

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8RCT_034 not in the Motif Atlas

Homologous match to HL_5J7L_166

Geometric discrepancy: 0.119

The information below is about HL_5J7L_166

Detailed Annotation

Pseudoknot geometry with 3' bulge

Broad Annotation

No text annotation

Motif group

HL_57176.2

Basepair signature

cWW-F-F-F

Number of instances in this motif group

14

Unit IDs

8RCT|1|72|G|1324
8RCT|1|72|U|1325
8RCT|1|72|U|1326
8RCT|1|72|A|1327
8RCT|1|72|A|1328
8RCT|1|72|U|1329
8RCT|1|72|C|1330

Current chains

Chain 72

23S ribosomal RNA

Nearby chains