HL_8RCT_054

3D structure

PDB id

8RCT (explore in PDB, NAKB, or RNA 3D Hub)

Description

Escherichia coli paused disome complex (Rotated disome interface class 2)

Experimental method

ELECTRON MICROSCOPY

Resolution

5.32 Å

Loop

Sequence

CUG(OMG)GGCGG

Length

9 nucleotides

Bulged bases

8RCT|1|72|G|2250

QA status

Modified nucleotides: OMG

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8RCT_054 not in the Motif Atlas

Homologous match to HL_7RQB_053

Geometric discrepancy: 0.0706

The information below is about HL_7RQB_053

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8RCT|1|72|C|2248
8RCT|1|72|U|2249
8RCT|1|72|G|2250
8RCT|1|72|OMG|2251
8RCT|1|72|G|2252
8RCT|1|72|G|2253
8RCT|1|72|C|2254
8RCT|1|72|G|2255
8RCT|1|72|G|2256

Current chains

Chain 72

23S ribosomal RNA

Nearby chains

Chain Y

Transfer RNA; tRNA

Chain h2

50S ribosomal protein L16

Chain z2

50S ribosomal protein L27