HL_8RCT_080

3D structure

PDB id

8RCT (explore in PDB, NAKB, or RNA 3D Hub)

Description

Escherichia coli paused disome complex (Rotated disome interface class 2)

Experimental method

ELECTRON MICROSCOPY

Resolution

5.32 Å

Loop

Sequence

AACUGAGACACGGU

Length

14 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8RCT_080 not in the Motif Atlas

Homologous match to HL_6CZR_079

Geometric discrepancy: 0.1725

The information below is about HL_6CZR_079

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_81205.2

Basepair signature

cWW-cWW-tWH-F-tWH-F-F-F-F-F

Number of instances in this motif group

3

Unit IDs

8RCT|1|A1|A|320
8RCT|1|A1|A|321
8RCT|1|A1|C|322
8RCT|1|A1|U|323
8RCT|1|A1|G|324
8RCT|1|A1|A|325
8RCT|1|A1|G|326
8RCT|1|A1|A|327
8RCT|1|A1|C|328
8RCT|1|A1|A|329
8RCT|1|A1|C|330
8RCT|1|A1|G|331
8RCT|1|A1|G|332
8RCT|1|A1|U|333

Current chains

Chain A1

16S ribosomal RNA

Nearby chains

Chain P1

30S ribosomal protein S16

Chain T1

Small ribosomal subunit protein bS20