HL_8RCT_144
3D structure
- PDB id
- 8RCT (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Escherichia coli paused disome complex (Rotated disome interface class 2)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 5.32 Å
Loop
- Sequence
- G(5MU)(PSU)CGAUCC
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Modified nucleotides: 5MU, PSU
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8RCT_144 not in the Motif Atlas
- Homologous match to HL_6CFJ_108
- Geometric discrepancy: 0.2049
- The information below is about HL_6CFJ_108
- Detailed Annotation
- T-loop with 2 stacked bulged bases
- Broad Annotation
- T-loop
- Motif group
- HL_28252.8
- Basepair signature
- cWW-tWH-F-F-F-F-F
- Number of instances in this motif group
- 140
Unit IDs
8RCT|1|Y|G|53
8RCT|1|Y|5MU|54
8RCT|1|Y|PSU|55
8RCT|1|Y|C|56
8RCT|1|Y|G|57
8RCT|1|Y|A|58
8RCT|1|Y|U|59
8RCT|1|Y|C|60
8RCT|1|Y|C|61
Current chains
- Chain Y
- tRNA-Ala (A/P-site)
Nearby chains
- Chain 72
- Large subunit ribosomal RNA; LSU rRNA
- Chain e2
- 50S ribosomal protein L5
- Chain h2
- 50S ribosomal protein L16
Coloring options: