HL_8RCT_146
3D structure
- PDB id
- 8RCT (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Escherichia coli paused disome complex (Rotated disome interface class 2)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 5.32 Å
Loop
- Sequence
- CCU(CM0)AC(6MZ)AG
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Modified nucleotides: CM0, 6MZ
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8RCT_146 not in the Motif Atlas
- Homologous match to HL_5IBB_210
- Geometric discrepancy: 0.19
- The information below is about HL_5IBB_210
- Detailed Annotation
- tRNA anticodon loop
- Broad Annotation
- Anticodon loop
- Motif group
- HL_06059.7
- Basepair signature
- cWW-F-F-F-F-F-F-F
- Number of instances in this motif group
- 51
Unit IDs
8RCT|1|Y1|C|31
8RCT|1|Y1|C|32
8RCT|1|Y1|U|33
8RCT|1|Y1|CM0|34
8RCT|1|Y1|A|35
8RCT|1|Y1|C|36
8RCT|1|Y1|6MZ|37
8RCT|1|Y1|A|38
8RCT|1|Y1|G|39
Current chains
- Chain Y1
- tRNA-Val (A/P-site)
Nearby chains
- Chain 71
- Large subunit ribosomal RNA; LSU rRNA
- Chain A1
- Small subunit ribosomal RNA; SSU rRNA
- Chain L1
- Small ribosomal subunit protein uS12
- Chain V2
- messenger RNA
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