HL_8RD8_072

3D structure

PDB id

8RD8 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of P. urativorans 70S ribosome in complex with hibernation factors Balon and RaiA (structure 1).

Experimental method

ELECTRON MICROSCOPY

Resolution

2.62 Å

Loop

Sequence

GAAGCUUGCUUC

Length

12 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8RD8_072 not in the Motif Atlas

Homologous match to HL_6CZR_073

Geometric discrepancy: 0.513

The information below is about HL_6CZR_073

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8RD8|1|iN|G|125
8RD8|1|iN|A|126
8RD8|1|iN|A|127
8RD8|1|iN|G|128
8RD8|1|iN|C|129
8RD8|1|iN|U|130
8RD8|1|iN|U|131
8RD8|1|iN|G|132
8RD8|1|iN|C|133
8RD8|1|iN|U|134
8RD8|1|iN|U|135
8RD8|1|iN|C|136

Current chains

Chain iN

16S rRNA

Nearby chains