HL_8RDW_026

3D structure

PDB id

8RDW (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of P. urativorans 70S ribosome in complex with hibernation factor Balon and EF-Tu(GDP) (structure 3).

Experimental method

ELECTRON MICROSCOPY

Resolution

2.74 Å

Loop

Sequence

GGUCAUACCGAC

Length

12 nucleotides

Bulged bases

8RDW|1|Z2|U|872, 8RDW|1|Z2|C|875

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8RDW|1|Z2|G|867
8RDW|1|Z2|G|868
8RDW|1|Z2|U|869
8RDW|1|Z2|C|870
8RDW|1|Z2|A|871
8RDW|1|Z2|U|872
8RDW|1|Z2|A|873
8RDW|1|Z2|C|874
8RDW|1|Z2|C|875
8RDW|1|Z2|G|876
8RDW|1|Z2|A|877
8RDW|1|Z2|C|878

Current chains

Chain Z2

23S rRNA

Nearby chains

Chain MM

Small ribosomal subunit protein uS13

Chain SP

Small ribosomal subunit protein uS19