HL_8RDW_036
3D structure
- PDB id
- 8RDW (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of P. urativorans 70S ribosome in complex with hibernation factor Balon and EF-Tu(GDP) (structure 3).
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.74 Å
Loop
- Sequence
- GUUAAUAUUC
- Length
- 10 nucleotides
- Bulged bases
- 8RDW|1|Z2|U|1380, 8RDW|1|Z2|U|1381
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8RDW_036 not in the Motif Atlas
- Homologous match to HL_7RQB_036
- Geometric discrepancy: 0.0828
- The information below is about HL_7RQB_036
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_69023.2
- Basepair signature
- cWW-tWH-F-F-F-F
- Number of instances in this motif group
- 16
Unit IDs
8RDW|1|Z2|G|1373
8RDW|1|Z2|U|1374
8RDW|1|Z2|U|1375
8RDW|1|Z2|A|1376
8RDW|1|Z2|A|1377
8RDW|1|Z2|U|1378
8RDW|1|Z2|A|1379
8RDW|1|Z2|U|1380
8RDW|1|Z2|U|1381
8RDW|1|Z2|C|1382
Current chains
- Chain Z2
- 23S rRNA
Nearby chains
- Chain Sn
- Large ribosomal subunit protein uL23
Coloring options: