3D structure

PDB id
8RDW (explore in PDB, NAKB, or RNA 3D Hub)
Description
Cryo-EM structure of P. urativorans 70S ribosome in complex with hibernation factor Balon and EF-Tu(GDP) (structure 3).
Experimental method
ELECTRON MICROSCOPY
Resolution
2.74 Å

Loop

Sequence
CAAGGAAG
Length
8 nucleotides
Bulged bases
None detected
QA status
Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

8RDW|1|Z2|C|1512
8RDW|1|Z2|A|1513
8RDW|1|Z2|A|1514
8RDW|1|Z2|G|1515
8RDW|1|Z2|G|1531
8RDW|1|Z2|A|1532
8RDW|1|Z2|A|1533
8RDW|1|Z2|G|1534

Current chains

Chain Z2
23S rRNA

Nearby chains

No other chains within 10Å

Coloring options:

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