HL_8RDW_071

3D structure

PDB id

8RDW (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of P. urativorans 70S ribosome in complex with hibernation factor Balon and EF-Tu(GDP) (structure 3).

Experimental method

ELECTRON MICROSCOPY

Resolution

2.74 Å

Loop

Sequence

GAAGCUUGCUUC

Length

12 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8RDW_071 not in the Motif Atlas

Homologous match to HL_6CZR_073

Geometric discrepancy: 0.523

The information below is about HL_6CZR_073

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8RDW|1|iN|G|125
8RDW|1|iN|A|126
8RDW|1|iN|A|127
8RDW|1|iN|G|128
8RDW|1|iN|C|129
8RDW|1|iN|U|130
8RDW|1|iN|U|131
8RDW|1|iN|G|132
8RDW|1|iN|C|133
8RDW|1|iN|U|134
8RDW|1|iN|U|135
8RDW|1|iN|C|136

Current chains

Chain iN

16S rRNA

Nearby chains