HL_8RL2_009
3D structure
- PDB id
- 8RL2 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human pre-60S - State 5
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.84 Å
Loop
- Sequence
- CGUAAG
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8RL2_009 not in the Motif Atlas
- Homologous match to HL_8C3A_010
- Geometric discrepancy: 0.0837
- The information below is about HL_8C3A_010
- Detailed Annotation
- GNRA
- Broad Annotation
- No text annotation
- Motif group
- HL_37824.2
- Basepair signature
- cWW-F-F-F-F
- Number of instances in this motif group
- 360
Unit IDs
8RL2|1|L5|C|368
8RL2|1|L5|G|369
8RL2|1|L5|U|370
8RL2|1|L5|A|371
8RL2|1|L5|A|372
8RL2|1|L5|G|373
Current chains
- Chain L5
- 28S rRNA
Nearby chains
- Chain CD
- GTP-binding protein 4
- Chain LC
- 60S ribosomal protein L4
- Chain Lj
- 60S ribosomal protein L37
- Chain Ll
- 60S ribosomal protein L39
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