HL_8RL2_040

3D structure

PDB id

8RL2 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human pre-60S - State 5

Experimental method

ELECTRON MICROSCOPY

Resolution

2.84 Å

Loop

Sequence

CGCGGCG

Length

7 nucleotides

Bulged bases

8RL2|1|L5|C|3673

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8RL2_040 not in the Motif Atlas

Geometric match to HL_8G9Z_001

Geometric discrepancy: 0.0718

The information below is about HL_8G9Z_001

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_75660.7

Basepair signature

cWW-F

Number of instances in this motif group

22

Unit IDs

8RL2|1|L5|C|3668
8RL2|1|L5|G|3669
8RL2|1|L5|C|3670
8RL2|1|L5|G|3671
8RL2|1|L5|G|3672
8RL2|1|L5|C|3673
8RL2|1|L5|G|3674

Current chains

Chain L5

28S rRNA

Nearby chains

Chain LA

60S ribosomal protein L8

Chain LN

60S ribosomal protein L15