HL_8RM5_002

3D structure

PDB id

8RM5 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the cross-exon pre-B+5'ssLNG+ATPyS complex

Experimental method

ELECTRON MICROSCOPY

Resolution

6.9 Å

Loop

Sequence

GUAUUGCAGUACCUC

Length

15 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8RM5|1|2|G|158
8RM5|1|2|U|159
8RM5|1|2|A|160
8RM5|1|2|U|161
8RM5|1|2|U|162
8RM5|1|2|G|163
8RM5|1|2|C|164
8RM5|1|2|A|165
8RM5|1|2|G|166
8RM5|1|2|U|167
8RM5|1|2|A|168
8RM5|1|2|C|169
8RM5|1|2|C|170
8RM5|1|2|U|171
8RM5|1|2|C|172

Current chains

Chain 2

U2 snRNA

Nearby chains

Chain 23

Small nuclear ribonucleoprotein Sm D3

Chain 2B

U2 small nuclear ribonucleoprotein B''