HL_8RPY_027

3D structure

PDB id

8RPY (explore in PDB, NAKB, or RNA 3D Hub)

Description

Escherichia coli 50S subunit in complex with the antimicrobial peptide Api137

Experimental method

ELECTRON MICROSCOPY

Resolution

2.64 Å

Loop

Sequence

AUGUUGGCUUAGAAGCAGCCAUCAU

Length

25 nucleotides

Bulged bases

8RPY|1|A|U|1061, 8RPY|1|A|U|1066, 8RPY|1|A|A|1070

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8RPY|1|A|A|1057
8RPY|1|A|U|1058
8RPY|1|A|G|1059
8RPY|1|A|U|1060
8RPY|1|A|U|1061
8RPY|1|A|G|1062
8RPY|1|A|G|1063
8RPY|1|A|C|1064
8RPY|1|A|U|1065
8RPY|1|A|U|1066
8RPY|1|A|A|1067
8RPY|1|A|G|1068
8RPY|1|A|A|1069
8RPY|1|A|A|1070
8RPY|1|A|G|1071
8RPY|1|A|C|1072
8RPY|1|A|A|1073
8RPY|1|A|G|1074
8RPY|1|A|C|1075
8RPY|1|A|C|1076
8RPY|1|A|A|1077
8RPY|1|A|U|1078
8RPY|1|A|C|1079
8RPY|1|A|A|1080
8RPY|1|A|U|1081

Current chains

Chain A

23S ribosomal RNA

Nearby chains