HL_8RRI_014

3D structure

PDB id

8RRI (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human mitochondrial ribosome in complex with antibiotic tigecycline

Experimental method

ELECTRON MICROSCOPY

Resolution

2.4 Å

Loop

Sequence

GCCUAAAAGCAGC

Length

13 nucleotides

Bulged bases

8RRI|1|A|A|2181

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8RRI|1|A|G|2174
8RRI|1|A|C|2175
8RRI|1|A|C|2176
8RRI|1|A|U|2177
8RRI|1|A|A|2178
8RRI|1|A|A|2179
8RRI|1|A|A|2180
8RRI|1|A|A|2181
8RRI|1|A|G|2182
8RRI|1|A|C|2183
8RRI|1|A|A|2184
8RRI|1|A|G|2185
8RRI|1|A|C|2186

Current chains

Chain A

16S mitochondrial rRNA

Nearby chains

Chain J

39S ribosomal protein L11, mitochondrial

Chain N

39S ribosomal protein L16, mitochondrial

Chain l

39S ribosomal protein L54, mitochondrial