Loop HL_8RRI

3D structure

PDB id: 8RRI (explore in PDB, NAKB, or RNA 3D Hub)
Description: Human mitochondrial ribosome in complex with antibiotic tigecycline
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.4 Å

Loop

Sequence: AAACAGUACCUAACAAACCCACAGGUCCUAAACUACCAAACCU
Length: 43 nucleotides
Bulged bases: 8RRI|1|A|G|2758, 8RRI|1|A|A|2760, 8RRI|1|A|C|2761, 8RRI|1|A|C|2762, 8RRI|1|A|U|2763, 8RRI|1|A|A|2764, 8RRI|1|A|A|2765, 8RRI|1|A|C|2766, 8RRI|1|A|A|2767, 8RRI|1|A|A|2768, 8RRI|1|A|A|2769, 8RRI|1|A|C|2772, 8RRI|1|A|A|2775, 8RRI|1|A|G|2776, 8RRI|1|A|C|2780, 8RRI|1|A|U|2781, 8RRI|1|A|A|2782, 8RRI|1|A|C|2785, 8RRI|1|A|U|2786, 8RRI|1|A|C|2789, 8RRI|1|A|A|2791, 8RRI|1|A|A|2792
QA status: Valid loop

Sequence variability

R3DSVS

Structural variability across Equivalence Class

R3DMCS EC

Structural variability across Rfam

R3DMCS Rfam

Detailed Annotation: No text annotation
Broad Annotation: No text annotation
Motif group: Not in a motif group
Basepair signature: Not available
Number of instances in this motif group: 0

Unit IDs

8RRI|1|A|A|2753
8RRI|1|A|A|2754
8RRI|1|A|A|2755
8RRI|1|A|C|2756
8RRI|1|A|A|2757
8RRI|1|A|G|2758
8RRI|1|A|U|2759
8RRI|1|A|A|2760
8RRI|1|A|C|2761
8RRI|1|A|C|2762
8RRI|1|A|U|2763
8RRI|1|A|A|2764
8RRI|1|A|A|2765
8RRI|1|A|C|2766
8RRI|1|A|A|2767
8RRI|1|A|A|2768
8RRI|1|A|A|2769
8RRI|1|A|C|2770
8RRI|1|A|C|2771
8RRI|1|A|C|2772
8RRI|1|A|A|2773
8RRI|1|A|C|2774
8RRI|1|A|A|2775
8RRI|1|A|G|2776
8RRI|1|A|G|2777
8RRI|1|A|U|2778
8RRI|1|A|C|2779
8RRI|1|A|C|2780
8RRI|1|A|U|2781
8RRI|1|A|A|2782
8RRI|1|A|A|2783
8RRI|1|A|A|2784
8RRI|1|A|C|2785
8RRI|1|A|U|2786
8RRI|1|A|A|2787
8RRI|1|A|C|2788
8RRI|1|A|C|2789
8RRI|1|A|A|2790
8RRI|1|A|A|2791
8RRI|1|A|A|2792
8RRI|1|A|C|2793
8RRI|1|A|C|2794
8RRI|1|A|U|2795

Current chains

Chain A: 16S mitochondrial rRNA

Nearby chains

Chain H: 39S ribosomal protein L9, mitochondrial
Chain X: 39S ribosomal protein L28, mitochondrial
Chain z: 39S ribosomal protein L1, mitochondrial

HL_8RRI_026