HL_8RRI_031
3D structure
- PDB id
- 8RRI (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human mitochondrial ribosome in complex with antibiotic tigecycline
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.4 Å
Loop
- Sequence
- AGUCCAUAU
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8RRI_031 not in the Motif Atlas
- Homologous match to HL_4WF9_056
- Geometric discrepancy: 0.1469
- The information below is about HL_4WF9_056
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_52011.2
- Basepair signature
- cWW-tSH-F-F-F-F-F
- Number of instances in this motif group
- 10
Unit IDs
8RRI|1|A|A|2958
8RRI|1|A|G|2959
8RRI|1|A|U|2960
8RRI|1|A|C|2961
8RRI|1|A|C|2962
8RRI|1|A|A|2963
8RRI|1|A|U|2964
8RRI|1|A|A|2965
8RRI|1|A|U|2966
Current chains
- Chain A
- 16S mitochondrial rRNA
Nearby chains
- Chain 4
- 39S ribosomal protein L36, mitochondrial
- Chain N
- 39S ribosomal protein L16, mitochondrial
- Chain l
- 39S ribosomal protein L54, mitochondrial
Coloring options: