HL_8RUM_005

3D structure

PDB id

8RUM (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of Oceanobacillus iheyensis group II intron in the presence of Li+, Mg2+, and intronistat B

Experimental method

X-RAY DIFFRACTION

Resolution

3.62 Å

Loop

Sequence

UUGCAUAACAAA

Length

12 nucleotides

Bulged bases

8RUM|1|A|G|179, 8RUM|1|A|C|180

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8RUM|1|A|U|177
8RUM|1|A|U|178
8RUM|1|A|G|179
8RUM|1|A|C|180
8RUM|1|A|A|181
8RUM|1|A|U|182
8RUM|1|A|A|183
8RUM|1|A|A|184
8RUM|1|A|C|185
8RUM|1|A|A|186
8RUM|1|A|A|187
8RUM|1|A|A|188

Current chains

Chain A

Domains 1-5

Nearby chains