HL_8RW1_027

3D structure

PDB id

8RW1 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of a yeast 48S-AUC preinitiation complex in closed conformation

Experimental method

ELECTRON MICROSCOPY

Resolution

3.35 Å

Loop

Sequence

UUUUUCUUAUGA

Length

12 nucleotides

Bulged bases

8RW1|1|2|U|1056

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8RW1|1|2|U|1053
8RW1|1|2|U|1054
8RW1|1|2|U|1055
8RW1|1|2|U|1056
8RW1|1|2|U|1057
8RW1|1|2|C|1058
8RW1|1|2|U|1059
8RW1|1|2|U|1060
8RW1|1|2|A|1061
8RW1|1|2|U|1062
8RW1|1|2|G|1063
8RW1|1|2|A|1064

Current chains

Chain 2

18S ribosomal RNA

Nearby chains

Chain B

Small ribosomal subunit protein eS1

Chain R

KLLA0B01474p

Chain b

40S ribosomal protein S27