HL_8SCB_037

3D structure

PDB id

8SCB (explore in PDB, NAKB, or RNA 3D Hub)

Description

Terminating ribosome with SRI-41315

Experimental method

ELECTRON MICROSCOPY

Resolution

2.5 Å

Loop

Sequence

CGCGGG

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8SCB_037 not in the Motif Atlas

Homologous match to HL_8C3A_030

Geometric discrepancy: 0.0853

The information below is about HL_8C3A_030

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_37824.2

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

360

Unit IDs

8SCB|1|5|C|2317
8SCB|1|5|G|2318
8SCB|1|5|C|2319
8SCB|1|5|G|2320
8SCB|1|5|G|2321
8SCB|1|5|G|2322

Current chains

Chain 5

28S_rRNA

Nearby chains

Chain e

eL32

Chain r

eL28