HL_8SCB_047

3D structure

PDB id

8SCB (explore in PDB, NAKB, or RNA 3D Hub)

Description

Terminating ribosome with SRI-41315

Experimental method

ELECTRON MICROSCOPY

Resolution

2.5 Å

Loop

Sequence

GGUUCC

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8SCB_047 not in the Motif Atlas

Geometric match to HL_5NFV_001

Geometric discrepancy: 0.2013

The information below is about HL_5NFV_001

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_69752.3

Basepair signature

cWW-F

Number of instances in this motif group

5

Unit IDs

8SCB|1|5|G|2705
8SCB|1|5|G|2706
8SCB|1|5|U|2707
8SCB|1|5|U|2708
8SCB|1|5|C|2709
8SCB|1|5|C|2710

Current chains

Chain 5

28S_rRNA

Nearby chains

Chain R

Ribosomal protein L19

Chain X

eL23