HL_8SCB_092

3D structure

PDB id

8SCB (explore in PDB, NAKB, or RNA 3D Hub)

Description

Terminating ribosome with SRI-41315

Experimental method

ELECTRON MICROSCOPY

Resolution

2.5 Å

Loop

Sequence

CCCCCGUG

Length

8 nucleotides

Bulged bases

8SCB|1|9|C|324

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8SCB_092 not in the Motif Atlas

Geometric match to HL_2ZZM_002

Geometric discrepancy: 0.2732

The information below is about HL_2ZZM_002

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_13963.3

Basepair signature

cWW-F-F

Number of instances in this motif group

4

Unit IDs

8SCB|1|9|C|322
8SCB|1|9|C|323
8SCB|1|9|C|324
8SCB|1|9|C|325
8SCB|1|9|C|326
8SCB|1|9|G|327
8SCB|1|9|U|328
8SCB|1|9|G|329

Current chains

Chain 9

18S_rRNA

Nearby chains

Chain GG

eS6