HL_8SUP_023

3D structure

PDB id

8SUP (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the 48S translation initiation complex assembled on the encephalomyocarditis virus IRES

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

AUUGAUAGCU

Length

10 nucleotides

Bulged bases

8SUP|1|2|U|1300, 8SUP|1|2|G|1302, 8SUP|1|2|C|1303

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8SUP|1|2|A|1295
8SUP|1|2|U|1296
8SUP|1|2|U|1297
8SUP|1|2|G|1298
8SUP|1|2|A|1299
8SUP|1|2|U|1300
8SUP|1|2|A|1301
8SUP|1|2|G|1302
8SUP|1|2|C|1303
8SUP|1|2|U|1304

Current chains

Chain 2

18S rRNA

Nearby chains

Chain Q

uS19

Chain e

uS14

Chain g

eS31