HL_8SUP_033

3D structure

PDB id

8SUP (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the 48S translation initiation complex assembled on the encephalomyocarditis virus IRES

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

UAUAAGAUA

Length

9 nucleotides

Bulged bases

8SUP|1|3|G|585

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8SUP|1|3|U|580
8SUP|1|3|A|581
8SUP|1|3|U|582
8SUP|1|3|A|583
8SUP|1|3|A|584
8SUP|1|3|G|585
8SUP|1|3|A|586
8SUP|1|3|U|587
8SUP|1|3|A|588

Current chains

Chain 3

EMCV mRNA

Nearby chains

Chain Q

uS19