HL_8T2X_120
3D structure
- PDB id
- 8T2X (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Hypomethylated yeast 80S bound with cycloheximide, P-site tRNA, A-site tRNA, messenger RNA and eIF5A, PRE
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.46 Å
Loop
- Sequence
- CUGAUUUUAUGCAG
- Length
- 14 nucleotides
- Bulged bases
- 8T2X|1|A1|A|1566, 8T2X|1|A1|U|1567, 8T2X|1|A1|U|1568, 8T2X|1|A1|U|1569, 8T2X|1|A1|U|1570, 8T2X|1|A1|G|1573
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8T2X|1|A1|C|1563
8T2X|1|A1|U|1564
8T2X|1|A1|G|1565
8T2X|1|A1|A|1566
8T2X|1|A1|U|1567
8T2X|1|A1|U|1568
8T2X|1|A1|U|1569
8T2X|1|A1|U|1570
8T2X|1|A1|A|1571
8T2X|1|A1|U|1572
8T2X|1|A1|G|1573
8T2X|1|A1|C|1574
8T2X|1|A1|A|1575
8T2X|1|A1|G|1576
Current chains
- Chain A1
- 25S rRNA
Nearby chains
- Chain A4
- 5.8S ribosomal RNA; 5.8S rRNA
- Chain AG
- 60S ribosomal protein L8-A
- Chain AX
- 60S ribosomal protein L25
Coloring options: