HL_8T2Y_038

3D structure

PDB id

8T2Y (explore in PDB, NAKB, or RNA 3D Hub)

Description

Hypomethylated yeast 80S bound with cycloheximide, P-site tRNA, and A-site tRNA, messenger RNA, PRE

Experimental method

ELECTRON MICROSCOPY

Resolution

2.2 Å

Loop

Sequence

CACCUUUG

Length

8 nucleotides

Bulged bases

8T2Y|1|A1|C|1762, 8T2Y|1|A1|U|1763, 8T2Y|1|A1|U|1764

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8T2Y|1|A1|C|1759
8T2Y|1|A1|A|1760
8T2Y|1|A1|C|1761
8T2Y|1|A1|C|1762
8T2Y|1|A1|U|1763
8T2Y|1|A1|U|1764
8T2Y|1|A1|U|1765
8T2Y|1|A1|G|1766

Current chains

Chain A1

25S rRNA

Nearby chains

Chain AR

60S ribosomal protein L19-A

Chain AU

60S ribosomal protein L22-A

Chain AX

60S ribosomal protein L25