HL_8T2Z_089

3D structure

PDB id

8T2Z (explore in PDB, NAKB, or RNA 3D Hub)

Description

Hypomethylated yeast 80S bound with cycloheximide, P-site tRNA, and A-site tRNA, messenger RNA, POST

Experimental method

ELECTRON MICROSCOPY

Resolution

2.4 Å

Loop

Sequence

CCAUUCGG

Length

8 nucleotides

Bulged bases

8T2Z|1|B5|C|491, 8T2Z|1|B5|A|492, 8T2Z|1|B5|C|495, 8T2Z|1|B5|G|496

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8T2Z|1|B5|C|490
8T2Z|1|B5|C|491
8T2Z|1|B5|A|492
8T2Z|1|B5|U|493
8T2Z|1|B5|U|494
8T2Z|1|B5|C|495
8T2Z|1|B5|G|496
8T2Z|1|B5|G|497

Current chains

Chain B5

18S rRNA

Nearby chains