HL_8T2Z_106
3D structure
- PDB id
- 8T2Z (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Hypomethylated yeast 80S bound with cycloheximide, P-site tRNA, and A-site tRNA, messenger RNA, POST
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.4 Å
Loop
- Sequence
- UUUCAAG
- Length
- 7 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8T2Z_106 not in the Motif Atlas
- Geometric match to HL_1P6V_001
- Geometric discrepancy: 0.3037
- The information below is about HL_1P6V_001
- Detailed Annotation
- UNCG variation
- Broad Annotation
- UNCG variation
- Motif group
- HL_53890.2
- Basepair signature
- cWW-F-F-F
- Number of instances in this motif group
- 15
Unit IDs
8T2Z|1|B5|U|1396
8T2Z|1|B5|U|1397
8T2Z|1|B5|U|1398
8T2Z|1|B5|C|1399
8T2Z|1|B5|A|1400
8T2Z|1|B5|A|1401
8T2Z|1|B5|G|1402
Current chains
- Chain B5
- 18S rRNA
Nearby chains
- Chain BR
- 40S ribosomal protein S17-A
Coloring options: