HL_8T30_050
3D structure
- PDB id
- 8T30 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Hypomethylated yeast 80S bound with cycloheximide, unmodified U2921, mid rotated
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.88 Å
Loop
- Sequence
- GGAAUUCAUUUUCC
- Length
- 14 nucleotides
- Bulged bases
- 8T30|1|A1|U|2537, 8T30|1|A1|C|2539, 8T30|1|A1|U|2541, 8T30|1|A1|U|2542, 8T30|1|A1|U|2543
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8T30|1|A1|G|2533
8T30|1|A1|G|2534
8T30|1|A1|A|2535
8T30|1|A1|A|2536
8T30|1|A1|U|2537
8T30|1|A1|U|2538
8T30|1|A1|C|2539
8T30|1|A1|A|2540
8T30|1|A1|U|2541
8T30|1|A1|U|2542
8T30|1|A1|U|2543
8T30|1|A1|U|2544
8T30|1|A1|C|2545
8T30|1|A1|C|2546
Current chains
- Chain A1
- 25S rRNA
Nearby chains
- Chain AA
- 60S ribosomal protein L2-A
- Chain AG
- 60S ribosomal protein L8-A
- Chain Ag
- 60S ribosomal protein L34-A
- Chain BB
- RPS1A isoform 1
Coloring options: