HL_8UAU_003

3D structure

PDB id

8UAU (explore in PDB, NAKB, or RNA 3D Hub)

Description

human ATE1 in complex with Arg-tRNA and a peptide substrate

Experimental method

ELECTRON MICROSCOPY

Resolution

5.7 Å

Loop

Sequence

GUUCGAAUC

Length

9 nucleotides

Bulged bases

8UAU|1|R|C|56

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8UAU_003 not in the Motif Atlas

Geometric match to HL_5NFV_001

Geometric discrepancy: 0.2796

The information below is about HL_5NFV_001

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_69752.2

Basepair signature

cWW-F

Number of instances in this motif group

7

Unit IDs

8UAU|1|R|G|53
8UAU|1|R|U|54
8UAU|1|R|U|55
8UAU|1|R|C|56
8UAU|1|R|G|57
8UAU|1|R|A|58
8UAU|1|R|A|59
8UAU|1|R|U|60
8UAU|1|R|C|61

Current chains

Chain R

RNA (76-MER)

Nearby chains

Chain A

Isoform ATE1-2 of Arginyl-tRNA--protein transferase 1