HL_8UBC_002

3D structure

PDB id

8UBC (explore in PDB, NAKB, or RNA 3D Hub)

Description

Diversity-generating retroelement (DGR) ribonucleoprotein reverse transcriptase - Resting State 1b

Experimental method

ELECTRON MICROSCOPY

Resolution

3.29 Å

Loop

Sequence

CUGAAAAUG

Length

9 nucleotides

Bulged bases

8UBC|1|I|U|120

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8UBC|1|I|C|113
8UBC|1|I|U|114
8UBC|1|I|G|115
8UBC|1|I|A|116
8UBC|1|I|A|117
8UBC|1|I|A|118
8UBC|1|I|A|119
8UBC|1|I|U|120
8UBC|1|I|G|121

Current chains

Chain I

Diversity-generating retroelement (DGR) RNA Sp

Nearby chains

Chain A

Reverse transcriptase