HL_8UBE_003

3D structure

PDB id

8UBE (explore in PDB, NAKB, or RNA 3D Hub)

Description

Diversity-generating retroelement (DGR) ribonucleoprotein reverse transcriptase - Resting State 1a

Experimental method

ELECTRON MICROSCOPY

Resolution

3.05 Å

Loop

Sequence

CUGAAAAUG

Length

9 nucleotides

Bulged bases

8UBE|1|I|U|120

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8UBE|1|I|C|113
8UBE|1|I|U|114
8UBE|1|I|G|115
8UBE|1|I|A|116
8UBE|1|I|A|117
8UBE|1|I|A|118
8UBE|1|I|A|119
8UBE|1|I|U|120
8UBE|1|I|G|121

Current chains

Chain I

Diversity-generating retroelement (DGR) RNA Sp

Nearby chains

Chain A

Reverse transcriptase