HL_8UD6_205

3D structure

PDB id

8UD6 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with cresomycin, mRNA, deacylated A-site tRNAphe, aminoacylated P-site fMet-tRNAmet, and deacylated E-site tRNAphe at 2.70A resolution

Experimental method

X-RAY DIFFRACTION

Resolution

2.7 Å

Loop

Sequence

CCCGCGAGGG

Length

10 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8UD6|1|2a|C|1028
8UD6|1|2a|C|1029
8UD6|1|2a|C|1030
8UD6|1|2a|G|1030|||A
8UD6|1|2a|C|1030|||B
8UD6|1|2a|G|1030|||C
8UD6|1|2a|A|1030|||D
8UD6|1|2a|G|1031
8UD6|1|2a|G|1032
8UD6|1|2a|G|1033

Current chains

Chain 2a

16S Ribosomal RNA

Nearby chains