HL_8UIY_083
3D structure
- PDB id
- 8UIY (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- In situ human P-Z state 80S ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.44 Å
Loop
- Sequence
- GUAAUUC
- Length
- 7 nucleotides
- Bulged bases
- 8UIY|1|S2|U|160, 8UIY|1|S2|U|161
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8UIY_083 not in the Motif Atlas
- Homologous match to HL_8CRE_193
- Geometric discrepancy: 0.2294
- The information below is about HL_8CRE_193
- Detailed Annotation
- GNRA related
- Broad Annotation
- GNRA related
- Motif group
- HL_34789.1
- Basepair signature
- cWW-F-F-F-F
- Number of instances in this motif group
- 335
Unit IDs
8UIY|1|S2|G|156
8UIY|1|S2|U|157
8UIY|1|S2|A|158
8UIY|1|S2|A|159
8UIY|1|S2|U|160
8UIY|1|S2|U|161
8UIY|1|S2|C|162
Current chains
- Chain S2
- 18S rRNA
Nearby chains
- Chain SG
- 40S ribosomal protein S6
- Chain SY
- 40S ribosomal protein S24
Coloring options: