3D structure

PDB id
8UIY (explore in PDB, NAKB, or RNA 3D Hub)
Description
In situ human P-Z state 80S ribosome
Experimental method
ELECTRON MICROSCOPY
Resolution
3.44 Å

Loop

Sequence
UCUCGGCCGGGGCCCGAA
Length
18 nucleotides
Bulged bases
8UIY|1|S2|G|752, 8UIY|1|S2|C|785, 8UIY|1|S2|G|793
QA status
Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

8UIY|1|S2|U|747
8UIY|1|S2|C|748
8UIY|1|S2|U|749
8UIY|1|S2|C|750
8UIY|1|S2|G|751
8UIY|1|S2|G|752
8UIY|1|S2|C|753
8UIY|1|S2|C|785
8UIY|1|S2|G|786
8UIY|1|S2|G|787
8UIY|1|S2|G|788
8UIY|1|S2|G|789
8UIY|1|S2|C|790
8UIY|1|S2|C|791
8UIY|1|S2|C|792
8UIY|1|S2|G|793
8UIY|1|S2|A|794
8UIY|1|S2|A|795

Current chains

Chain S2
18S rRNA

Nearby chains

Chain SE
Small ribosomal subunit protein eS4, X isoform
Chain SG
40S ribosomal protein S6
Chain SH
Small ribosomal subunit protein eS7

Coloring options:

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