HL_8UIZ_026

3D structure

PDB id

8UIZ (explore in PDB, NAKB, or RNA 3D Hub)

Description

In situ human P-E state 80S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.43 Å

Loop

Sequence

GGGCCGAAACGAUCU

Length

15 nucleotides

Bulged bases

8UIZ|1|L5|C|1763, 8UIZ|1|L5|A|1765, 8UIZ|1|L5|A|1766, 8UIZ|1|L5|A|1767, 8UIZ|1|L5|G|1769

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8UIZ|1|L5|G|1759
8UIZ|1|L5|G|1760
8UIZ|1|L5|G|1761
8UIZ|1|L5|C|1762
8UIZ|1|L5|C|1763
8UIZ|1|L5|G|1764
8UIZ|1|L5|A|1765
8UIZ|1|L5|A|1766
8UIZ|1|L5|A|1767
8UIZ|1|L5|C|1768
8UIZ|1|L5|G|1769
8UIZ|1|L5|A|1770
8UIZ|1|L5|U|1771
8UIZ|1|L5|C|1772
8UIZ|1|L5|U|1773

Current chains

Chain L5

28S rRNA

Nearby chains

Chain LI

Ribosomal protein uL16-like

Chain LJ

60S ribosomal protein L11

Chain SP

Small ribosomal subunit protein uS19

Chain SS

40S ribosomal protein S18