3D structure

PDB id
8UIZ (explore in PDB, NAKB, or RNA 3D Hub)
Description
In situ human P-E state 80S ribosome
Experimental method
ELECTRON MICROSCOPY
Resolution
3.43 Å

Loop

Sequence
AGCCCCGAGGGGCU
Length
14 nucleotides
Bulged bases
8UIZ|1|L5|G|4104
QA status
Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

8UIZ|1|L5|A|4098
8UIZ|1|L5|G|4099
8UIZ|1|L5|C|4100
8UIZ|1|L5|C|4101
8UIZ|1|L5|C|4102
8UIZ|1|L5|C|4103
8UIZ|1|L5|G|4104
8UIZ|1|L5|A|4105
8UIZ|1|L5|G|4106
8UIZ|1|L5|G|4107
8UIZ|1|L5|G|4108
8UIZ|1|L5|G|4109
8UIZ|1|L5|C|4110
8UIZ|1|L5|U|4111

Current chains

Chain L5
28S rRNA

Nearby chains

Chain LG
60S ribosomal protein L7a
Chain Lg
60S ribosomal protein L34

Coloring options:

Copyright 2025 BGSU RNA group. Page generated in 0.2568 s