3D structure

PDB id
8UIZ (explore in PDB, NAKB, or RNA 3D Hub)
Description
In situ human P-E state 80S ribosome
Experimental method
ELECTRON MICROSCOPY
Resolution
3.43 Å

Loop

Sequence
GUCGCCGUGCC
Length
11 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

8UIZ|1|S2|G|377
8UIZ|1|S2|U|378
8UIZ|1|S2|C|379
8UIZ|1|S2|G|380
8UIZ|1|S2|C|381
8UIZ|1|S2|C|382
8UIZ|1|S2|G|383
8UIZ|1|S2|U|384
8UIZ|1|S2|G|385
8UIZ|1|S2|C|386
8UIZ|1|S2|C|387

Current chains

Chain S2
18S rRNA [Homo sapiens]

Nearby chains

Chain SI
40S ribosomal protein S8
Chain SL
40S ribosomal protein S11

Coloring options:

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