3D structure

PDB id
8UIZ (explore in PDB, NAKB, or RNA 3D Hub)
Description
In situ human P-E state 80S ribosome
Experimental method
ELECTRON MICROSCOPY
Resolution
3.43 Å

Loop

Sequence
UAUUUUGUUGGUUUUCG
Length
17 nucleotides
Bulged bases
8UIZ|1|S2|G|891, 8UIZ|1|S2|U|899
QA status
Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

8UIZ|1|S2|U|885
8UIZ|1|S2|A|886
8UIZ|1|S2|U|887
8UIZ|1|S2|U|888
8UIZ|1|S2|U|889
8UIZ|1|S2|U|890
8UIZ|1|S2|G|891
8UIZ|1|S2|U|892
8UIZ|1|S2|U|893
8UIZ|1|S2|G|894
8UIZ|1|S2|G|895
8UIZ|1|S2|U|896
8UIZ|1|S2|U|897
8UIZ|1|S2|U|898
8UIZ|1|S2|U|899
8UIZ|1|S2|C|900
8UIZ|1|S2|G|901

Current chains

Chain S2
18S rRNA [Homo sapiens]

Nearby chains

Chain SG
40S ribosomal protein S6

Coloring options:

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