3D structure

PDB id
8UJ9 (explore in PDB, NAKB, or RNA 3D Hub)
Description
In situ human P state 80S ribosome
Experimental method
ELECTRON MICROSCOPY
Resolution
3.64 Å

Loop

Sequence
UAUUUUGUUGGUUUUCG
Length
17 nucleotides
Bulged bases
8UJ9|1|S2|G|891, 8UJ9|1|S2|U|897, 8UJ9|1|S2|U|899
QA status
Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

8UJ9|1|S2|U|885
8UJ9|1|S2|A|886
8UJ9|1|S2|U|887
8UJ9|1|S2|U|888
8UJ9|1|S2|U|889
8UJ9|1|S2|U|890
8UJ9|1|S2|G|891
8UJ9|1|S2|U|892
8UJ9|1|S2|U|893
8UJ9|1|S2|G|894
8UJ9|1|S2|G|895
8UJ9|1|S2|U|896
8UJ9|1|S2|U|897
8UJ9|1|S2|U|898
8UJ9|1|S2|U|899
8UJ9|1|S2|C|900
8UJ9|1|S2|G|901

Current chains

Chain S2
18S rRNA [Homo sapiens]

Nearby chains

Chain SG
40S ribosomal protein S6

Coloring options:

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