HL_8UJB_101
3D structure
- PDB id
- 8UJB (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- In situ human 80S ribosome with EBP1 (consensus map)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.67 Å
Loop
- Sequence
- UAUUUUGUUGGUUUUCG
- Length
- 17 nucleotides
- Bulged bases
- 8UJB|1|S2|U|890, 8UJB|1|S2|G|891, 8UJB|1|S2|U|896, 8UJB|1|S2|U|899
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8UJB|1|S2|U|885
8UJB|1|S2|A|886
8UJB|1|S2|U|887
8UJB|1|S2|U|888
8UJB|1|S2|U|889
8UJB|1|S2|U|890
8UJB|1|S2|G|891
8UJB|1|S2|U|892
8UJB|1|S2|U|893
8UJB|1|S2|G|894
8UJB|1|S2|G|895
8UJB|1|S2|U|896
8UJB|1|S2|U|897
8UJB|1|S2|U|898
8UJB|1|S2|U|899
8UJB|1|S2|C|900
8UJB|1|S2|G|901
Current chains
- Chain S2
- 18S rRNA
Nearby chains
- Chain SG
- 40S ribosomal protein S6
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