HL_8UJC_012
3D structure
- PDB id
- 8UJC (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- In situ human 60S ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.87 Å
Loop
- Sequence
- GGCGGACUGUCCCCAGUGCGCC
- Length
- 22 nucleotides
- Bulged bases
- 8UJC|1|L5|G|1178, 8UJC|1|L5|U|1179, 8UJC|1|L5|C|1181, 8UJC|1|L5|C|1182
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8UJC|1|L5|G|1170
8UJC|1|L5|G|1171
8UJC|1|L5|C|1172
8UJC|1|L5|G|1173
8UJC|1|L5|G|1174
8UJC|1|L5|A|1175
8UJC|1|L5|C|1176
8UJC|1|L5|U|1177
8UJC|1|L5|G|1178
8UJC|1|L5|U|1179
8UJC|1|L5|C|1180
8UJC|1|L5|C|1181
8UJC|1|L5|C|1182
8UJC|1|L5|C|1183
8UJC|1|L5|A|1184
8UJC|1|L5|G|1185
8UJC|1|L5|U|1186
8UJC|1|L5|G|1187
8UJC|1|L5|C|1188
8UJC|1|L5|G|1189
8UJC|1|L5|C|1190
8UJC|1|L5|C|1191
Current chains
- Chain L5
- 28S rRNA
Nearby chains
- Chain L7
- 5S ribosomal RNA; 5S rRNA
- Chain LD
- Large ribosomal subunit protein uL18
- Chain LI
- Ribosomal protein uL16-like
Coloring options: